Well, granted spring over would be the best, but if your only goal is 35" tires...
do the MORE shackles, which only add 5/8 lift. but are strong as hell, and give you greasable poly bushings.
then do the 1" BL... and a ton of cutting on your wheel wells
When you did the TJ flares, did you cut them to true tj opening? I so then you should be good.
Give you some info... I have 4" springs, 3" Custom BL, and 1.5" spring hanger change and 5/8 Boomerang shackles. but I never cut my wheel wells, and I rub on full flex all the time
want to see what works? lets get together and you can try on my 35" and see what you got for room...